I will give you my post-RotS headcanon for Ahsoka! Ahsoka is offworld when Order 66 and Operation: Knightfall go down, and she manages to survive and get back to Coruscant, where she's promptly arrested by stormtroopers, who fortunately turn out to be the remnants of her and Anakin's old squadron, including Captain Rex. He is not very happy with the current state of affairs (and also lies to her by telling her that Anakin died protecting Senator Amidala), and while his original plan was to get her offworld and somewhere safe, he eventually decides to defect with her. I'm pretty sure they're both dead by ANH, but they make a lot of trouble for the Empire before dying.
Alternately, this is the plot for the post-RotS Ahsoka/Rex story I haven't written yet. *sideeye*
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Alternately, this is the plot for the post-RotS Ahsoka/Rex story I haven't written yet. *sideeye*